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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6155650_6158310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6155650 - 6158310

Intron Length:

2661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CTGATATTAACC

Flanking Amino Acid:

AASRRKNLPWLVLRIQEIFD

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.6

33.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

77.8

0.63

0.9

73.8

40.5

Minor 5ss

43.4

-0.7

3.2

57.2

46.9

Minor BPS

55.3

0.15

1.7

63.68

41.8

Associated Gene:

Gene:

DENND2C

Ensembl Gene ID:

ENSAPLG00000010131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043353

6144511 - 6164344

19834

ENSAPLT00000010576

6144511 - 6164572

20062

ENSAPLT00000044797

6144511 - 6163760

19250