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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6161164_6164192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6161164 - 6164192

Intron Length:

3029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAGGAGCA

5'SS Class:

major

3'SS Sequence:

TTTTTGTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

GTTTTCTTCTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.1

53.4

38.4

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

86.1

0.81

0.7

84.9

29.9

Minor 5ss

30.6

-2.2

3.5

35.2

42.1

Minor BPS

43.6

-0.4

3.5

75.8

41.6

Associated Gene:

Gene:

DENND2C

Ensembl Gene ID:

ENSAPLG00000010131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027248

6161064 - 6174220

13157

ENSAPLT00000010576

6144511 - 6164572

20062

ENSAPLT00000043353

6144511 - 6164344

19834