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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6161164_6164461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6161164 - 6164461

Intron Length:

3298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

GTTTTCTTCTTT

Flanking Amino Acid:

SVLQCGLSHQVVITGSPCSS

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

86.1

0.81

0.7

84.9

29.9

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

43.6

-0.4

3.5

75.8

41.6

Associated Gene:

Gene:

DENND2C

Ensembl Gene ID:

ENSAPLG00000010131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037088

6160987 - 6174220

13234

ENSAPLT00000010048

6160987 - 6174220

13234