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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6191842_6192691_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6191842 - 6192691

Intron Length:

850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

GTCTTGTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

AATTGCTGAATC

Flanking Amino Acid:

SDEVEFTVVPEAEDGIIVYD

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

71.2

40.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

75.9

0.58

0.9

73.5

37.1

Minor 5ss

34.9

-1.7

2.9

52.3

44.3

Minor BPS

55.6

0.16

1.9

67.06

38.4

Associated Gene:

Gene:

CSDE1

Ensembl Gene ID:

ENSAPLG00000008797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039543

6186318 - 6202203

15886