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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6196131_6197121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6196131 - 6197121

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTAGTGCC

5'SS Class:

major

3'SS Sequence:

CGTTAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAA

U12 Branch Point Sequence:

TCAACGTTAATT

Flanking Amino Acid:

ILPEERINGQEVFYLTYTPE

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

68.5

38.3

Major BPS

67.8

0.44

1.1

69.6

37.5

Major PPT

76.8

0.6

0.9

40.7

Minor 5ss

-2.1

38.3

32.6

Minor BPS

55.9

0.26

2.1

73.31

43.8

Associated Gene:

Gene:

CSDE1

Ensembl Gene ID:

ENSAPLG00000008797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009248

6186318 - 6202203

15886