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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6220751_6221926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6220751 - 6221926

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTCAT

5'SS Class:

major

3'SS Sequence:

TGCATTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTTTCTCATAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

68.1

38.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.7

0.9

72.6

42.2

Minor 5ss

32.6

-2

46.8

42.6

Minor BPS

51.1

0.11

1.9

74.2

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008665

6220648 - 6227589

6942