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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6224848_6225979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6224848 - 6225979

Intron Length:

1132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

AGATTCTTAACA

Flanking Amino Acid:

VLVDFTKRLPGFESLASEDQ

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.7

1.12

0.6

91.3

19.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

88.8

0.87

0.6

23.9

Minor 5ss

44.8

-0.6

2.8

61.1

43.8

Minor BPS

75.4

0.79

1.1

75.43

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008665

6220648 - 6227589

6942