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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6226109_6226648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6226109 - 6226648

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGGCTGTGAATT

Flanking Amino Acid:

ISECQSSTSESHIRLPDHAT

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

77.6

0.62

0.9

68.5

42.1

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

45.4

-0.2

2.1

62.5

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008665

6220648 - 6227589

6942