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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6253484_6253836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6253484 - 6253836

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAAATC

5'SS Class:

major

3'SS Sequence:

CTTTTAATTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

SDSSEHSDLLSIVSEEEMFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.4

0.53

1.1

35.2

Minor 5ss

37.5

-1.4

3.2

49.3

41.3

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020899

6253316 - 6254153

838