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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6260553_6261319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6260553 - 6261319

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACAGGAA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGCAT

U12 Branch Point Sequence:

CTTCTGTGAAAC

Flanking Amino Acid:

TICAGFCMTRDSNGKKLLLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.27

1.1

53.7

39.5

Major BPS

58.4

0.21

1.3

69.4

37.7

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

26.4

-2.7

3.6

28.1

Minor BPS

44.3

-0.4

2.2

57.5

Associated Gene:

Gene:

TSHB

Ensembl Gene ID:

ENSAPLG00000007748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008038

6260391 - 6261562

1172