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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6272780_6273324_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6272780 - 6273324

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGCCTCTTACTT

Flanking Amino Acid:

GVFAFIGKKVAIQEVQKIYE

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

78.8

0.65

0.9

73.1

37.2

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

55.1

0.24

1.6

69.3

42.1

Associated Gene:

Gene:

TSPAN2

Ensembl Gene ID:

ENSAPLG00000007499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007785

6268260 - 6288828

20569