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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6273400_6273847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6273400 - 6273847

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTCCCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

GTAAACTGACAT

Flanking Amino Acid:

ARESQFLLGAFFACLLVIFA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

82.7

0.73

0.7

76.9

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

42.4

-0.4

1.9

58.38

43.2

Associated Gene:

Gene:

TSPAN2

Ensembl Gene ID:

ENSAPLG00000007499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007785

6268260 - 6288828

20569