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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6318132_6318682_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6318132 - 6318682

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTTCATT

Flanking Amino Acid:

PECWGMSTWQVHSVMSMLYY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

100

1.24

0.5

100

Major PPT

85.6

0.8

0.7

78.8

34.4

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

67.5

0.63

1.7

86.64

33.8

Associated Gene:

Gene:

NGF

Ensembl Gene ID:

ENSAPLG00000001822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044984

6317400 - 6319694

2295

ENSAPLT00000001815

6317400 - 6321503

4104