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Intron Name: Anas_platyrhynchos_platyrhynchos_27_669186_669681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

669186 - 669681

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTCTCACCC

Flanking Amino Acid:

ISSAVFRTVLDYYKTGIINC

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.7

0.89

0.7

84.8

28.7

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

58.4

0.24

1.8

72.6

38.5

Associated Gene:

Gene:

KCTD20

Ensembl Gene ID:

ENSAPLG00000014389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042387

644350 - 674108

29759

ENSAPLT00000015005

657529 - 674108

16580