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Intron Name: Anas_platyrhynchos_platyrhynchos_27_698424_699489_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

698424 - 699489

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCCTGATGA

5'SS Class:

weak_major

3'SS Sequence:

TCCCTAAGCAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTCTCCCTAAGC

Flanking Amino Acid:

YDSIGRGEASTKSSLTAKSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

39.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

51.9

0.04

1.1

34.8

Minor 5ss

30.2

-2.3

3.9

38.5

40.9

Minor BPS

0.11

66.82

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043618

698383 - 700607

2225