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Intron Name: Anas_platyrhynchos_platyrhynchos_27_711396_714265_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

711396 - 714265

Intron Length:

2870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACACTCA

5'SS Class:

weak_major

3'SS Sequence:

TAATCTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TAATCTCCAACA

Flanking Amino Acid:

PPPRRRYPRSKSLSRDRRRE

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.1

55.8

38.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

68.7

0.42

63.3

37.7

Minor 5ss

44.1

-0.6

3.1

46.4

Minor BPS

52.1

0.06

1.9

66.9

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014358

710492 - 714356

3865