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Intron Name: Anas_platyrhynchos_platyrhynchos_27_737499_737749_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
737499 - 737749

Intron Length:
251

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGCAG

5'SS Class:
major

3'SS Sequence:
CCGTTCACCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCATTAT

U12 Branch Point Sequence:
TCTCCGTTCACC

Flanking Amino Acid:
LPGEMPPSLQMSPQQSEKCC

Intron Amino Acid Position:
347

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.3
0.41
1.1
53.5
45

Major BPS
54.4
0.11
1.4
48
45.4

Major PPT
68.4
0.41
0.9
61.5
33.6

Minor 5ss
29.1
-2.4
3.4
38.3
46.7

Minor BPS
49.1
-0
2.4
67.56
44.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

734613 - 741745
7133

734613 - 741745
7133

734613 - 745033
10421

735245 - 745033
9789