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Intron Name: Anas_platyrhynchos_platyrhynchos_27_76612_78007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76612 - 78007

Intron Length:

1396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTTGGCTTCATG

Flanking Amino Acid:

KQVVVCGYGEVGKGCCAALK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

83.5

0.75

0.8

77.6

31.1

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

48.1

-0.3

2.3

62.41

46.2

Associated Gene:

Gene:

AHCYL1

Ensembl Gene ID:

ENSAPLG00000003315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035130

76100 - 81691

5592

ENSAPLT00000023197

75942 - 82950

7009

ENSAPLT00000003445

72836 - 81950

9115