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Intron Name: Anas_platyrhynchos_platyrhynchos_27_780399_782875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

780399 - 782875

Intron Length:

2477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GAGGTCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GTATGCTGACAC

Flanking Amino Acid:

SPPAMDMLKMSWDTELEAFA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

68.1

0.41

62.6

43.9

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

43.1

-0.5

2.1

54.42

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013822

780243 - 787227

6985