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Intron Name: Anas_platyrhynchos_platyrhynchos_27_78758_79134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78758 - 79134

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTGGGTTCATCT

Flanking Amino Acid:

RQVDVVITCTGNKNVVTREH

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.4

42.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

67.3

0.39

0.9

60.9

35.1

Minor 5ss

38.9

-1.2

3.6

54.5

49.7

Minor BPS

43.2

-0.4

2.2

63.25

47.3

Associated Gene:

Gene:

AHCYL1

Ensembl Gene ID:

ENSAPLG00000003315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035130

76100 - 81691

5592

ENSAPLT00000023197

75942 - 82950

7009

ENSAPLT00000003445

72836 - 81950

9115