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Intron Name: Anas_platyrhynchos_platyrhynchos_27_79405_79981_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79405 - 79981

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGCTGA

5'SS Class:

major

3'SS Sequence:

TGCTGTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

GCAAGTTCAACT

Flanking Amino Acid:

DGKRVVLLAEGRLLNLSCST

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

62.2

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

69.9

0.45

0.9

61.7

Minor 5ss

36.7

-1.5

3.2

47.2

48.2

Minor BPS

45.3

-0.2

1.9

58.45

44.4

Associated Gene:

Gene:

AHCYL1

Ensembl Gene ID:

ENSAPLG00000003315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035130

76100 - 81691

5592

ENSAPLT00000023197

75942 - 82950

7009

ENSAPLT00000003445

72836 - 81950

9115