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Intron Name: Anas_platyrhynchos_platyrhynchos_27_820874_821234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

820874 - 821234

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGGA

5'SS Class:

major

3'SS Sequence:

TCTCTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCACAA

U12 Branch Point Sequence:

TCTCTCTTTACA

Flanking Amino Acid:

FINTYAVDDNFSQASVIRSY

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

70.5

35.4

Major BPS

55.9

0.15

63.2

34.1

Major PPT

88.7

0.87

0.7

83.3

25.1

Minor 5ss

-2.4

3.1

35.6

41.4

Minor BPS

63.3

0.41

1.6

72.36

39.3

Associated Gene:

Gene:

MTCH1

Ensembl Gene ID:

ENSAPLG00000012793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021238

817823 - 828516

10694