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Intron Name: Anas_platyrhynchos_platyrhynchos_27_825254_825651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

825254 - 825651

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TGTTTGTCAGCT

Flanking Amino Acid:

VSRVVSHPLHVISMRCMVQF

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

0.62

65.3

41.5

Major PPT

76.5

0.6

0.8

69.5

36.8

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

46.5

-0.1

2.4

72.64

44.2

Associated Gene:

Gene:

MTCH1

Ensembl Gene ID:

ENSAPLG00000012793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013341

818423 - 829326

10904