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Intron Name: Anas_platyrhynchos_platyrhynchos_27_852596_856006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

852596 - 856006

Intron Length:

3411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCG

5'SS Class:

major

3'SS Sequence:

CTCTCTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

CTCTCTGCCACA

Flanking Amino Acid:

ATPKHRQTRAGVFLGLGLSG

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

63.4

41.5

Major BPS

66.3

0.41

37.5

Major PPT

73.6

0.53

0.8

67.7

32.4

Minor 5ss

29.4

-2.4

3.5

38.7

46.6

Minor BPS

41.1

-0.7

2.4

54.34

Associated Gene:

Gene:

ADIPOR1

Ensembl Gene ID:

ENSAPLG00000016148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016859

851968 - 859929

7962