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Intron Name: Anas_platyrhynchos_platyrhynchos_27_863135_863314_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

863135 - 863314

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CTTTCCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTCCTTTCCATT

Flanking Amino Acid:

SVAWNTLMVMFSCCGVLGPE

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.4

44.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

84.6

0.78

0.8

81.8

28.5

Minor 5ss

33.5

-1.9

2.8

36.6

41.8

Minor BPS

45.4

-0.2

1.9

64.38

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016939

861504 - 863611

2108