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Intron Name: Anas_platyrhynchos_platyrhynchos_27_87506_87955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87506 - 87955

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGCTAT

U12 Branch Point Sequence:

GCCTGGCTATCG

Flanking Amino Acid:

SMRQTFRAELGAPLYNNEPF

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

47.4

-0.1

1.5

44.2

48.3

Major PPT

77.6

0.62

0.9

68.5

42.1

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

33.1

-1.4

2.5

35.92

45.6

Associated Gene:

Gene:

STRIP1

Ensembl Gene ID:

ENSAPLG00000002822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002889

86435 - 93970

7536