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Intron Name: Anas_platyrhynchos_platyrhynchos_27_879228_880983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

879228 - 880983

Intron Length:

1756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

AAGCTTTGAACT

Flanking Amino Acid:

FYRLSNIYAQAKHHSLPPVS

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

74.8

0.62

39.8

Major PPT

85.1

0.79

0.8

80.2

31.8

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

53.3

0.18

1.4

65.62

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022992

872630 - 888951

16322

ENSAPLT00000017015

872630 - 888951

16322