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Intron Name: Anas_platyrhynchos_platyrhynchos_27_886849_887993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

886849 - 887993

Intron Length:

1145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGACATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCCTTCTTGACA

Flanking Amino Acid:

EQYRTAQLTRDDTDDPMEMK

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

68.9

0.43

0.9

64.8

35.5

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

72.1

0.69

1.2

73.41

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022992

872630 - 888951

16322

ENSAPLT00000017015

872630 - 888951

16322