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Intron Name: Anas_platyrhynchos_platyrhynchos_27_89115_89710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89115 - 89710

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGGAA

U12 Branch Point Sequence:

TTCTTCTTGTCC

Flanking Amino Acid:

PKGLPWAPKVREKDIEMFLE

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.1

43.2

Major BPS

45.4

-0.2

1.4

40.8

41.4

Major PPT

81.6

0.71

0.8

76.4

32.3

Minor 5ss

32.9

-2

42.1

44.4

Minor BPS

47.1

-0.2

3.5

72.77

39.1

Associated Gene:

Gene:

STRIP1

Ensembl Gene ID:

ENSAPLG00000002822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002889

86435 - 93970

7536