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Intron Name: Anas_platyrhynchos_platyrhynchos_27_977622_978424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

977622 - 978424

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTGTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

AAGTACTAAAAT

Flanking Amino Acid:

NVVNSGGMVMMVPGAGSVPA

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

76.5

0.6

0.9

72.3

32.5

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

48.8

-0

1.9

66.14

43.8

Associated Gene:

Gene:

NFYA

Ensembl Gene ID:

ENSAPLG00000002694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042037

976079 - 985598

9520

ENSAPLT00000002734

976079 - 985598

9520

ENSAPLT00000046409

976079 - 985598

9520