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Intron Name: Anas_platyrhynchos_platyrhynchos_27_978592_979128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

978592 - 979128

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTTAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATTTTCTTAAAG

Flanking Amino Acid:

VNADGTILQQVTVPVTGMIT

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

78.3

0.64

79.1

32.9

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

73.4

0.6

1.4

74.89

36.7

Associated Gene:

Gene:

NFYA

Ensembl Gene ID:

ENSAPLG00000002694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002734

976079 - 985598

9520

ENSAPLT00000046409

976079 - 985598

9520

ENSAPLT00000042037

976079 - 985598

9520