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Intron Name: Anas_platyrhynchos_platyrhynchos_27_980001_981278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

980001 - 981278

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

CTTTCTTCCACA

Flanking Amino Acid:

PVSGTQGLQQIQLVQPGQIQ

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.1

24.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

84.5

0.78

0.7

79.8

25.8

Minor 5ss

31.8

-2.1

37.8

Minor BPS

54.9

0.15

71.01

41.7

Associated Gene:

Gene:

NFYA

Ensembl Gene ID:

ENSAPLG00000002694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002734

976079 - 985598

9520

ENSAPLT00000046409

976079 - 985598

9520