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Intron Name: Anas_platyrhynchos_platyrhynchos_27_981426_985476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

981426 - 985476

Intron Length:

4051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

VVQAGQIQQQVQGQPLMVQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.4

37.1

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

75.3

0.57

0.8

68.4

37.4

Minor 5ss

27.5

-2.6

3.6

37.2

47.4

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

NFYA

Ensembl Gene ID:

ENSAPLG00000002694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046409

976079 - 985598

9520