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Intron Name: Anas_platyrhynchos_platyrhynchos_27_983765_985476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

983765 - 985476

Intron Length:

1712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CTATTCCCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTGTTCCTATTC

Flanking Amino Acid:

VVQAGQIQQQQGGVTAVQLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.4

37.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

71.9

0.49

0.9

67.5

33.5

Minor 5ss

27.5

-2.6

3.6

37.2

47.4

Minor BPS

47.2

-0.2

1.9

57.89

41.8

Associated Gene:

Gene:

NFYA

Ensembl Gene ID:

ENSAPLG00000002694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042037

976079 - 985598

9520

ENSAPLT00000002734

976079 - 985598

9520