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Intron Name: Anas_platyrhynchos_platyrhynchos_27_990115_990262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

990115 - 990262

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGAT

5'SS Class:

major

3'SS Sequence:

CTTTTCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACTGTTTTAAAA

Flanking Amino Acid:

FGGVQELLDQQKKTGEVAVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

77.5

32.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.3

0.82

0.6

85.5

21.9

Minor 5ss

30.3

-2.3

3.2

39.2

39.9

Minor BPS

55.6

0.17

1.5

61.82

38.8

Associated Gene:

Gene:

OARD1

Ensembl Gene ID:

ENSAPLG00000002869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002908

988977 - 991255

2279