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Intron Name: Anas_platyrhynchos_platyrhynchos_27_994935_996826_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

994935 - 996826

Intron Length:

1892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTTTTAGA

5'SS Class:

weak_major

3'SS Sequence:

ATCTGCCTCTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

AATGCTATAACC

Flanking Amino Acid:

MIAIIYSKLYASLLSTFYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.3

57.6

40.8

Major BPS

84.7

0.86

74.3

40.7

Major PPT

51.4

0.03

1.7

62.1

39.3

Minor 5ss

-1.1

2.5

40.9

Minor BPS

56.6

0.19

1.7

66.9

38.4

Associated Gene:

Gene:

APOBEC2

Ensembl Gene ID:

ENSAPLG00000002895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002922

994366 - 996854

2489