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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1012010_1048414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1012010 - 1048414

Intron Length:

36405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCATCCTGGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTGTCTCATCC

Flanking Amino Acid:

MPEFMANLRLRFEKGRIYTF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

60.3

0.23

38.2

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

52.6

0.06

1.9

69.92

41.8

Associated Gene:

Gene:

MYO1D

Ensembl Gene ID:

ENSAPLG00000005131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023026

890864 - 1048509

157646