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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1092390_1093104_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1092390 - 1093104

Intron Length:
715

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGTTT

5'SS Class:
strong_major

3'SS Sequence:
TAAATGGTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
TTTCATTTAAAT

Flanking Amino Acid:
PDGLGKCLVTGNYVPGTETH

Intron Amino Acid Position:
550

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.9
1.01
0.8
88.6
27.1

Major BPS
100
1.24
0.5
100
0

Major PPT
62.9
0.29
1.1
58.7
46.6

Minor 5ss
42.7
-0.8
3.4
64.1
47.4

Minor BPS
65.8
0.58
1.6
84.06
35.9

Associated Gene:

Gene:
MAP3K14

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1076890 - 1099882
22993