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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1107309_1107527_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1107309 - 1107527

Intron Length:
219

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCCGAT

5'SS Class:
major

3'SS Sequence:
GTCTCCACCACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCAGAT

U12 Branch Point Sequence:
TCTGTCTCCACC

Flanking Amino Acid:
NGSEDQLDTKSPMQKARRQQ

Intron Amino Acid Position:
1095

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.2
0.41
1.2
63.4
43.1

Major BPS
61.5
0.29
1.1
56.9
40.5

Major PPT
69.2
0.43
0.9
61.9
33.5

Minor 5ss
42.5
-0.8
3.5
64.2
47.3

Minor BPS
47.5
-0.2
2.1
61.43
44.4

Associated Gene:

Gene:
FMNL1

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1106052 - 1111901
5850

1106582 - 1111777
5196

1106052 - 1116851
10800