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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1108455_1108565_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1108455 - 1108565

Intron Length:
111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGCACCC

5'SS Class:
major

3'SS Sequence:
ACCCTCTCTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAT

U12 Branch Point Sequence:
TGGTCACTGATC

Flanking Amino Acid:
ELHFLDKAGSVSLDSVLQDV

Intron Amino Acid Position:
973

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.4
0.36
1.2
54.3
43.4

Major BPS
71.2
0.53
1
61
37.5

Major PPT
75.7
0.58
0.8
69.2
30.7

Minor 5ss
37.4
-1.4
3.3
51.9
44.8

Minor BPS
47.5
-0.2
1.9
60.44
38.9

Associated Gene:

Gene:
FMNL1

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1106052 - 1111901
5850

1106582 - 1111777
5196

1106052 - 1116851
10800