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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1109249_1109420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1109249 - 1109420

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TGCACCTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

CCTTCCTGAGCC

Flanking Amino Acid:

SSSKLRNILEIVLAFGNYMN

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

69.4

0.44

0.9

65.6

35.9

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

57.8

0.23

1.8

67.11

44.4

Associated Gene:

Gene:

FMNL1

Ensembl Gene ID:

ENSAPLG00000003619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029626

1106582 - 1111777

5196

ENSAPLT00000003709

1106052 - 1116851

10800

ENSAPLT00000045003

1106052 - 1111901

5850