Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_1109490_1109592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1109490 - 1109592

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGTG

5'SS Class:

major

3'SS Sequence:

CTGCTGTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

GCTCACACACTT

Flanking Amino Acid:

FNDTAQLLMPQLNAIIAASM

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

63.5

42.9

Major BPS

55.5

0.14

64.3

32.4

Major PPT

71.9

0.49

0.9

68.8

37.1

Minor 5ss

29.9

-2.3

3.5

39.9

46.1

Minor BPS

38.1

-0.8

52.59

Associated Gene:

Gene:

FMNL1

Ensembl Gene ID:

ENSAPLG00000003619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045003

1106052 - 1111901

5850

ENSAPLT00000029626

1106582 - 1111777

5196

ENSAPLT00000003709

1106052 - 1116851

10800