Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_1113760_1115245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1113760 - 1115245

Intron Length:

1486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACGC

5'SS Class:

major

3'SS Sequence:

CTTGCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CCCTGCTCAGCT

Flanking Amino Acid:

GVSKVRHLTVRLNPSHSRKA

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

60.8

44.4

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

0.5

65.6

Minor 5ss

37.9

-1.4

3.1

51.7

44.8

Minor BPS

44.5

-0.3

2.2

59.42

49.6

Associated Gene:

Gene:

FMNL1

Ensembl Gene ID:

ENSAPLG00000003619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003709

1106052 - 1116851

10800