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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1115730_1116141_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1115730 - 1116141

Intron Length:
412

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAAGGAGG

5'SS Class:
major

3'SS Sequence:
CTGTGCTCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTAAC

U12 Branch Point Sequence:
AACCCACTAACC

Flanking Amino Acid:
LEISLRTNYIGWVQEFLNEE

Intron Amino Acid Position:
102

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.9
0.68
1.1
64.3
47.1

Major BPS
64.5
0.36
1
65.2
28.2

Major PPT
70.9
0.47
0.9
61.7
40

Minor 5ss
31.2
-2.1
3.1
31.4
42.5

Minor BPS
47.5
-0.2
1.9
58.07
39.7

Associated Gene:

Gene:
FMNL1

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1106052 - 1116851
10800