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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1180547_1180780_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1180547 - 1180780

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

TGTCACAGAGGT

Flanking Amino Acid:

ENIIDTFVVESAQGEVTDFL

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

83.1

0.74

0.8

81.2

36.5

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

37.9

-0.8

2.1

57.85

43.8

Associated Gene:

Gene:

NMT1

Ensembl Gene ID:

ENSAPLG00000009872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010320

1177899 - 1195368

17470