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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1180952_1181899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1180952 - 1181899

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCGCTTCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

GTGCAAATGATT

Flanking Amino Acid:

RTMKLYRLPETPKTPGLRPM

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

0.45

57.8

Major PPT

74.1

0.54

0.8

68.9

31.6

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

40.9

-0.6

1.9

56.79

39.2

Associated Gene:

Gene:

NMT1

Ensembl Gene ID:

ENSAPLG00000009872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010320

1177899 - 1195368

17470