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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1182009_1182432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1182009 - 1182432

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAA

U12 Branch Point Sequence:

TCTCCCACAGCG

Flanking Amino Acid:

VVLPKPVGTCRYWHRSLNPR

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

52.9

0.07

1.4

64.5

42.8

Major PPT

82.9

0.74

0.9

77.3

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

44.6

-0.5

2.1

54.52

45.9

Associated Gene:

Gene:

NMT1

Ensembl Gene ID:

ENSAPLG00000009872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010320

1177899 - 1195368

17470