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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1183171_1183827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1183171 - 1183827

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAC

U12 Branch Point Sequence:

GGGACCTTAGGT

Flanking Amino Acid:

RFDYSPEFLLWALRPPGWLP

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

62.5

0.31

1.2

54.8

42.1

Major PPT

80.6

0.69

0.8

37.9

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

48.1

-0

1.9

62.48

46.8

Associated Gene:

Gene:

NMT1

Ensembl Gene ID:

ENSAPLG00000009872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010320

1177899 - 1195368

17470