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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1184721_1187036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1184721 - 1187036

Intron Length:

2316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCAAT

U12 Branch Point Sequence:

ACGTCCCAATGT

Flanking Amino Acid:

FWDTQPVPKLGEVVNTHGPV

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.2

34.9

Major BPS

59.3

0.23

1.3

66.9

37.7

Major PPT

82.5

0.73

0.8

76.7

31.9

Minor 5ss

31.9

-2.1

3.3

41.7

44.9

Minor BPS

39.2

-0.7

2.3

54.3

47.3

Associated Gene:

Gene:

NMT1

Ensembl Gene ID:

ENSAPLG00000009872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010320

1177899 - 1195368

17470