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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1187182_1188384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1187182 - 1188384

Intron Length:

1203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACCGAC

5'SS Class:

major

3'SS Sequence:

TTTCTACCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TGTCCTTTCATC

Flanking Amino Acid:

PEQAQDQPVKVNSLPAERIQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.2

62.8

38.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

80.7

0.69

0.8

78.4

29.2

Minor 5ss

36.7

-1.5

3.3

49.2

47.3

Minor BPS

57.1

0.21

1.7

68.24

37.6

Associated Gene:

Gene:

NMT1

Ensembl Gene ID:

ENSAPLG00000009872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010320

1177899 - 1195368

17470